PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID cra_locus_67796_iso_1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
Family CAMTA
Protein Properties Length: 68aa    MW: 8048.91 Da    PI: 9.1243
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
cra_locus_67796_iso_1genomeMPGR-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-144.23.7e-142067349
                                 CG-1  3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvry 49
                                         +e ++rwl++ ei++iL+n++++++ +e++ rp++gsl L++rk++ry
  cra_locus_67796_iso_1_len_467_ver_3 20 DEaQHRWLRPAEICEILQNYRNFQIPAEHPYRPSNGSLNLFDRKVFRY 67
                                         5669******************************************94 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143725.9411568IPR005559CG-1 DNA-binding domain
PfamPF038597.1E-112167IPR005559CG-1 DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 68 aa     Download sequence    Send to blast
MADGLRYAPG AQLNVKQLID EAQHRWLRPA EICEILQNYR NFQIPAEHPY RPSNGSLNLF  60
DRKVFRYX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012853297.11e-25PREDICTED: calmodulin-binding transcription activator 3
SwissprotQ8GSA76e-24CMTA3_ARATH; Calmodulin-binding transcription activator 3
TrEMBLJ3LKU84e-25J3LKU8_ORYBR; Uncharacterized protein
STRINGOB03G16740.11e-24(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14489811